Files
helios/server/test/extract.test.ts
marcuspaico e81d07975a fix(labs): strict numeric parsing, atomic confirm guard, test integrity
- normalize.ts num(): parseFloat truncated at the first comma, so "1,200"
  silently became 1 (1000x error) and "5,5" became 5. Now strictly matches
  either US thousands-grouping or a plain number spanning the whole string;
  anything else (incl. ambiguous "5,5") returns null instead of a wrong value.
- labs.ts confirm handler: the pending-status check ran before the request
  body was read, so two concurrent confirms could both pass it and
  double-insert. Added a guarded UPDATE ... WHERE status = 'pending' as the
  first statement inside the existing synchronous transaction; zero rows
  affected throws and the route returns 409, with the fast-path check kept
  for the common case.
- Added missing `await` on two rejects.toThrow assertions (llm.test.ts,
  extract.test.ts) that were previously resolving before the assertion
  settled.
- Bumped the 11th-failed-login rate-limit test to a 30s timeout — 10
  sequential argon2id verifies can exceed bun:test's 5s default under load.
2026-08-17 16:17:03 -07:00

47 lines
2.0 KiB
TypeScript

import { describe, expect, test } from "bun:test";
import { mkdtempSync } from "node:fs";
import { tmpdir } from "node:os";
import { join } from "node:path";
import { openDb } from "../src/db";
import { loadOrCreateKey } from "../src/lib/crypto";
import { extractFromText } from "../src/lib/extract";
const FIXTURE_TEXT = `
Sample Diagnostics — Final Report
Collected: 15 Jan 2026
CHEMISTRY
Glucose (Fasting) 100 mg/dL (70-99) H
LIPIDS
LDL Cholesterol 3.1 mmol/L (<3.4)
`;
describe("extractFromText", () => {
test("passes text to LLM and validates the draft shape", async () => {
let userPrompt = "";
const mock = (async (_: any, init: any) => {
userPrompt = JSON.parse(String(init.body)).messages[1].content;
return new Response(JSON.stringify({ choices: [{ message: { content: JSON.stringify({
collectedDate: "2026-01-15",
labName: "Sample Diagnostics",
markers: [
{ panel: "chemistry", name: "Glucose (Fasting)", value: "100", unit: "mg/dL", referenceRange: "70-99", flagged: true },
{ panel: "lipids", name: "LDL Cholesterol", value: "3.1", unit: "mmol/L", referenceRange: "<3.4", flagged: false },
],
}) } }] }), { status: 200 });
}) as typeof fetch;
const dir = mkdtempSync(join(tmpdir(), "helios-"));
const draft = await extractFromText({ db: openDb(dir), key: loadOrCreateKey(dir), fetchImpl: mock }, FIXTURE_TEXT);
expect(userPrompt).toContain("Glucose (Fasting)");
expect(draft.markers).toHaveLength(2);
expect(draft.collectedDate).toBe("2026-01-15");
expect(draft.markers[0].flagged).toBe(true);
});
test("malformed LLM output → llm_error, not a crash", async () => {
const mock = (async () => new Response(JSON.stringify({ choices: [{ message: { content: '{"markers": "not an array"}' } }] }), { status: 200 })) as unknown as typeof fetch;
const dir = mkdtempSync(join(tmpdir(), "helios-"));
await expect(extractFromText({ db: openDb(dir), key: loadOrCreateKey(dir), fetchImpl: mock }, "x")).rejects.toThrow(/llm_error/);
});
});